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长非编码RNA是大豆多种驯化性状和叶蝉抗性的基础
作者:小柯机器人 发布时间:2024/4/30 16:44:25

美国普渡大学马渐新等研究人员合作发现,长非编码RNA是大豆多种驯化性状和叶蝉抗性的基础。相关论文于2024年4月29日在线发表在《自然—遗传学》杂志上。

研究人员发现调节大豆不同驯化性状的多个数量性状位点,是由两个串联的长非编码 RNA(lncRNA)基因组成的位点的多效应。这些lncRNA基因各含有两个反向重复序列,源自MYB基因的编码序列,在野生大豆中的功能是产生小RNA(sRNA)物种簇,通过转录后调控抑制其MYB基因亲属的表达。
 
相比之下,lncRNA基因在栽培大豆中的表达受到严重抑制,因此相应的MYB基因高度表达,形成了多种明显的驯化性状以及叶蝉抗性。倒置重复序列形成于甘氨酸属从Phaseolus-Vigna品系分化之前,具有很强的结构-功能制约性。这项研究举例说明了植物驯化过程中的一种选择目标,并确定了lncRNA的形成和作用机制。

据介绍,人们对lncRNA的起源和功能仍然知之甚少。

附:英文原文

Title: Long noncoding RNAs underlie multiple domestication traits and leafhopper resistance in soybean

Author: Wang, Weidong, Duan, Jingbo, Wang, Xutong, Feng, Xingxing, Chen, Liyang, Clark, Chancelor B., Swarm, Stephen A., Wang, Jinbin, Lin, Sen, Nelson, Randall L., Meyers, Blake C., Feng, Xianzhong, Ma, Jianxin

Issue&Volume: 2024-04-29

Abstract: The origin and functionality of long noncoding RNA (lncRNA) remain poorly understood. Here, we show that multiple quantitative trait loci modulating distinct domestication traits in soybeans are pleiotropic effects of a locus composed of two tandem lncRNA genes. These lncRNA genes, each containing two inverted repeats, originating from coding sequences of the MYB genes, function in wild soybeans by generating clusters of small RNA (sRNA) species that inhibit the expression of their MYB gene relatives through post-transcriptional regulation. By contrast, the expression of lncRNA genes in cultivated soybeans is severely repressed, and, consequently, the corresponding MYB genes are highly expressed, shaping multiple distinct domestication traits as well as leafhopper resistance. The inverted repeats were formed before the divergence of the Glycine genus from the Phaseolus–Vigna lineage and exhibit strong structure–function constraints. This study exemplifies a type of target for selection during plant domestication and identifies mechanisms of lncRNA formation and action.

DOI: 10.1038/s41588-024-01738-2

Source: https://www.nature.com/articles/s41588-024-01738-2

期刊信息

Nature Genetics:《自然—遗传学》,创刊于1992年。隶属于施普林格·自然出版集团,最新IF:41.307
官方网址:https://www.nature.com/ng/
投稿链接:https://mts-ng.nature.com/cgi-bin/main.plex