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阶段和背景决定复合致癌突变的功能
作者:小柯机器人 发布时间:2020/5/30 13:04:05

美国斯隆—凯特林癌症研究所Barry S. Taylor、Ed Reznik等研究人员合作取得一项新成果。他们的最新工作表明,阶段和背景决定复合致癌突变的功能。这一研究成果于2020年5月27日在线发表在《自然》上。

研究人员发现几乎有四分之一的人类肿瘤包含癌症相关基因的复合突变,并被定义为同一基因和肿瘤中的两个或多个非同义的体细胞突变。复合突变体富集在特定基因中,具有非常见热点突变频率的上升,并且出现在反映背景特定选择压力的等位基因构型中。顺式作用复合突变在某些剂量效应占主导地位的基因(例如TERT)中是多态的,而它们导致其他基因(例如TP53)的功能选择。
 
总的来说,复合突变是由背景和等位基因特异性选择压力引起的驱动基因改变,部分取决于基因和突变功能,并产生复杂结果(通常是新的形态的功能)。
 
据悉,癌症是由于驱动子突变导致克隆生长和疾病发展的结果。单个驱动基因突变的发现和功能表征是癌症研究的主要目标,这阐明了无数的表型和治疗性靶点。然而,在常见和罕见的癌症基因和肿瘤类型中,突变型癌症基因的连续遗传进化及其出现的等位基因背景都鲜为人知。
 
附:英文原文
 
Title: Phase and context shape the function of composite oncogenic mutations

Author: Alexander N. Gorelick, Francisco J. Snchez-Rivera, Yanyan Cai, Craig M. Bielski, Evan Biederstedt, Philip Jonsson, Allison L. Richards, Neil Vasan, Alexander V. Penson, Noah D. Friedman, Yu-Jui Ho, Timour Baslan, Chaitanya Bandlamudi, Maurizio Scaltriti, Nikolaus Schultz, Scott W. Lowe, Ed Reznik, Barry S. Taylor

Issue&Volume: 2020-05-27

Abstract: Cancers develop as a result of driver mutations1,2 that lead to clonal outgrowth and the evolution of disease3,4. The discovery and functional characterization of individual driver mutations are central aims of cancer research, and have elucidated myriad phenotypes5 and therapeutic vulnerabilities6. However, the serial genetic evolution of mutant cancer genes7,8 and the allelic context in which they arise is poorly understood in both common and rare cancer genes and tumour types. Here we find that nearly one in four human tumours contains a composite mutation of a cancer-associated gene, defined as two or more nonsynonymous somatic mutations in the same gene and tumour. Composite mutations are enriched in specific genes, have an elevated rate of use of less-common hotspot mutations acquired in a chronology driven in part by oncogenic fitness, and arise in an allelic configuration that reflects context-specific selective pressures. cis-acting composite mutations are hypermorphic in some genes in which dosage effects predominate (such as TERT), whereas they lead to selection of function in other genes (such as TP53). Collectively, composite mutations are driver alterations that arise from context- and allele-specific selective pressures that are dependent in part on gene and mutation function, and which lead to complex—often neomorphic—functions of biological and therapeutic importance.

DOI: 10.1038/s41586-020-2315-8

Source: https://www.nature.com/articles/s41586-020-2315-8

期刊信息

Nature:《自然》,创刊于1869年。隶属于施普林格·自然出版集团,最新IF:43.07
官方网址:http://www.nature.com/
投稿链接:http://www.nature.com/authors/submit_manuscript.html