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患者合作研究可实现罕见癌症的基因组和临床发现
作者:小柯机器人 发布时间:2020/2/13 10:22:43

近日,美国博德研究所Nikhil Wagle及其团队首次提出血管肉瘤项目:通过患者合作研究实现罕见癌症的基因组和临床发现。这一研究成果于2020年2月10日在线发表在国际学术期刊《自然—医学》上。

研究人员表示,尽管罕见癌症占成人肿瘤的25%,但由于疾病发病率低且患者人群地理分布分散,因此很难进行研究,这导致罕见癌症患者的临床需求未能得到满足。
 
研究人员评估了使用在线参与的患者合作研究方法是否可以克服这些挑战,重点是血管肉瘤,一种在美国每年发病300例的肉瘤。研究人员描述了血管肉瘤项目(ASCproject)的开发,该计划使美国和加拿大患者可以远程共享其临床信息和生物标本进行研究。该项目不断产生并公开发布有关肿瘤和种系标本的临床注释基因组数据。
 
在18个月的时间里,有338名患者登记参加ASC项目,占所有血管肉瘤患者的很大比例。47个肿瘤的全外显子测序(WES)显示了重复突变的基因,包括KDR、TP53和PIK3CA。PIK3CA激活突变主要在原发性乳腺血管肉瘤中观察到,这提示了治疗的基本原理。头、颈、面部和头皮血管肉瘤(HNFS)与高的肿瘤突变负担(TMB)和显著的紫外线损伤突变特征相关,这表明对于HNFS血管肉瘤亚群患者,紫外线损伤可能是一种原因,并且抑制免疫检查点可能是有效的。
 
病历回顾显示,两名患有HNFS血管肉瘤的患者已接受了靶向程序性死亡1蛋白(anti-PD-1)抗体的标签外治疗性使用,并经历了异常的应答,这表明可将免疫检查点抑制作为HNFS血管肉瘤的治疗方法。这种与患者合作的方法为发现血管肉瘤患者的病因和潜在疗法提供了机会。总之,这项概念验证研究表明,让患者直接参与研究可以克服罕见疾病的障碍,并可以实现新发现。
 
附:英文原文

Title: The Angiosarcoma Project: enabling genomic and clinical discoveries in a rare cancer through patient-partnered research

Author: Corrie A. Painter, Esha Jain, Brett N. Tomson, Michael Dunphy, Rachel E. Stoddard, Beena S. Thomas, Alyssa L. Damon, Shahrayz Shah, Dewey Kim, Jorge Gmez Tejeda Zaudo, Jason L. Hornick, Yen-Lin Chen, Priscilla Merriam, Chandrajit P. Raut, George D. Demetri, Brian A. Van Tine, Eric S. Lander, Todd R. Golub, Nikhil Wagle

Issue&Volume: 2020-02-10

Abstract: Despite rare cancers accounting for 25% of adult tumors1, they are difficult to study due to the low disease incidence and geographically dispersed patient populations, which has resulted in significant unmet clinical needs for patients with rare cancers. We assessed whether a patient-partnered research approach using online engagement can overcome these challenges, focusing on angiosarcoma, a sarcoma with an annual incidence of 300 cases in the United States. Here we describe the development of the Angiosarcoma Project (ASCproject), an initiative enabling US and Canadian patients to remotely share their clinical information and biospecimens for research. The project generates and publicly releases clinically annotated genomic data on tumor and germline specimens on an ongoing basis. Over 18 months, 338 patients registered for the ASCproject, which comprises a large proportion of all patients with angiosarcoma. Whole-exome sequencing (WES) of 47 tumors revealed recurrently mutated genes that included KDR, TP53, and PIK3CA. PIK3CA-activating mutations were observed predominantly in primary breast angiosarcoma, which suggested a therapeutic rationale. Angiosarcoma of the head, neck, face and scalp (HNFS) was associated with a high tumor mutation burden (TMB) and a dominant ultraviolet damage mutational signature, which suggested that for the subset of patients with angiosarcoma of HNFS, ultraviolet damage may be a causative factor and that immune checkpoint inhibition may be beneficial. Medical record review revealed that two patients with HNFS angiosarcoma had received off-label therapeutic use of antibody to the programmed death-1 protein (anti-PD-1) and had experienced exceptional responses, which highlights immune checkpoint inhibition as a therapeutic avenue for HNFS angiosarcoma. This patient-partnered approach has catalyzed an opportunity to discover the etiology and potential therapies for patients with angiosarcoma. Collectively, this proof-of-concept study demonstrates that empowering patients to directly participate in research can overcome barriers in rare diseases and can enable discoveries.

DOI: 10.1038/s41591-019-0749-z

Source: https://www.nature.com/articles/s41591-019-0749-z

期刊信息

Nature Medicine:《自然—医学》,创刊于1995年。隶属于施普林格·自然出版集团,最新IF:30.641
官方网址:https://www.nature.com/nm/
投稿链接:https://mts-nmed.nature.com/cgi-bin/main.plex