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新技术实现纳米分辨率的原位结构测定
作者:小柯机器人 发布时间:2019/11/26 21:54:49

使用TYGRESS方法在纳米分辨率下进行原位结构测定,这一成果由美国德克萨斯大学西南医学中心Daniela Nicastro团队近日取得。2019年11月25日国际学术期刊《自然—方法学》在线发表了这一研究成果。

研究人员表示,由拥挤的细胞环境的低温电子断层图(cryo-ET)计算出的亚断层图平均值的分辨率通常由于子图的信号丢失和未对准而受到限制。相比之下,单颗粒低温电子显微镜(SP-cryo-EM)通常可以达到分离复合物的近原子分辨率。

研究人员报告了一种称为“层析成像引导的亚细胞结构3D重建”(TYGRESS)的方法,该方法是cryo-ET和SP-cryo-EM的混合体,能够在拥挤的细胞环境中实现接近纳米的复合物分辨率。TYGRESS结合了SP-cryo-EM(具有良好信噪比和对比度的图像,以及最小的辐射损伤)和亚断层图平均(复杂样品中大分子的三维排列)的优势。

使用TYGRESS,研究人员确定了完整睫状轴突的结构,分辨率高达12Å。这些结果揭示了cryo-ET无法看到的许多结构细节。TYGRESS也适用于亚断层图平均的细胞复合物成像。

附:英文原文

Title: In situ structure determination at nanometer resolution using TYGRESS

Author: Kangkang Song, Zhiguo Shang, Xiaofeng Fu, Xiaochu Lou, Nikolaus Grigorieff, Daniela Nicastro

Issue&Volume: 2019-11-25

Abstract: The resolution of subtomogram averages calculated from cryo-electron tomograms (cryo-ET) of crowded cellular environments is often limited owing to signal loss in, and misalignment of, the subtomograms. By contrast, single-particle cryo-electron microscopy (SP-cryo-EM) routinely reaches near-atomic resolution of isolated complexes. We report a method called ‘tomography-guided 3D reconstruction of subcellular structures’ (TYGRESS) that is a hybrid of cryo-ET and SP-cryo-EM, and is able to achieve close-to-nanometer resolution of complexes inside crowded cellular environments. TYGRESS combines the advantages of SP-cryo-EM (images with good signal-to-noise ratio and contrast, as well as minimal radiation damage) and subtomogram averaging (three-dimensional alignment of macromolecules in a complex sample). Using TYGRESS, we determined the structure of the intact ciliary axoneme with up to resolution of 12. These results reveal many structural details that were not visible by cryo-ET alone. TYGRESS is generally applicable to cellular complexes that are amenable to subtomogram averaging.

DOI: 10.1038/s41592-019-0651-0

Source: https://www.nature.com/articles/s41592-019-0651-0

期刊信息

Nature Methods:《自然—方法学》,创刊于2004年。隶属于施普林格·自然出版集团,最新IF:28.467
官方网址:https://www.nature.com/nmeth/
投稿链接:https://mts-nmeth.nature.com/cgi-bin/main.plex